Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858458.1_cds_XP_016513909.1_26406
CDS Infomation

[gene=LOC107830777] [db_xref=GeneID:107830777] [protein=dnaJ protein ERDJ2A-like] [protein_id=XP_016513909.1] [location=join(3210..3395,3488..3583,4195..4315,4417..4523,4687..4904,5179..5356,5466..5585,6503..6589,7180..7290,8628..9464)] [gbkey=CDS]
Sequence

ATGGCGGCTTCCGAAGAGAACAGTGCACTTTTCCCCATCTTTGTCTTGACTTTAATGGCT
CTGCCATTAGTTCCTTACACTATAGTCAATTTATTTGGTGCTTTCAAGAAAAAGGCTGCC
AAAATCAACTGCCAGTGTTCGGTCTGCGTTCGGTCCGGAAAGTATCATAAATCCATATTC
AAGCGGATTTCAAACTTCTCAACATACAGTAATCTAACCCTTGTACTGCTGTGGGTTGTC
ATGGCTGTTCTTGTTTATTACATCAAGCATATCAGCACTGAGGTCCAAATATTCGAGCCG
TTCAGTATTCTTGGACTGGAACATGGAGCTTCAGACTCTGAAATAAAGAAGGCATATCGA
AGACTTTCCATCCAGTATCATCCTGATAAAAATCCAGATCCAGAGGCACACTCATACTTT
GTTGAGTACATCTCAAAGGCTTATCAGGCTCTGACAGATCCAATATCTCGGGAAAATTTT
GAAAAATATGGCCATCCGGATGGACGACAGGGGCTTCAAATGGGCATTGCCCTCCCTCAG
TTCCTTTTAAACATTGATGGAGCATCTGAAGGAATACTGTTGCTTGGAATTGTTGGAGTC
TGTATAATTCTGCCCTTGACAATTTCTGTTATATACTTGTCTAGGTCGTCAAAGTATACT
GGGAACTATGTCATGCACTCTACATTAGCTGCATATTACCACTTAATGAAGCCTTCTTTA
GCTCCAAGCAAGGTCATGGATGTTTTCATTAAGGCTTCTGAATTCATGGATATTCCTGTT
CGTCGGACTGATGAAGAACCTCTGCAGAGACTATTTGTCTTGGTTAGAAGTGAGCTAAAT
CTGGATCTTAAGAATATTCGGCAAGAACAGGCTAAGTTTTGGAAGCAGCACCCTGCATTA
GTAAAGACTGAACTGTTGCTTCAAACCCAATTGACACGTGAGACGGCAGCTTTGTCTCCA
ACTTTACAGCGTGATTTCAGACGTGTGCTTGAACTCGCACCTCGGCTTCTGGAAGAATTG
ATGAAGATGGCTATTATTCCACGCCCTCCTGTGGGGCATGGATGGCTAAGACCTGCAATA
GGAGTGGTGGAACTGTCTCAGAGTGTTGTTCAGGCGGTACCTCTCAGCGCAAGGAAAGCA
GCAGGTGGATCCAGTGAAGGGTATGCACCGTTTTTGCAGCTGCCATACTTTAGTGAGGCT
GTTGTCAAAAAGATTGCAAGAAAGAAAGTTCGTACATTTCAAGACTTCCGTGATATGACA
CCAGATGAACGCGAAGATCTGCTGACTCAAGTTGCTGGGTTCTCAAACTCGGAATCCCAC
GATGTGGAGATGGTTCTTAAAATGATGCCTTCAGTGACAATTGATATCACATGTGAGACA
GAAGGTGAGGAGGGAATTCAAGAGGGTGACATCGTTACCATGCATGCTTGGGTCACTCTC
AAGCGTGGTAACGGCCTGATTCGTGCCCTTCCACATTGTCCTTATTTTCCTTCTGACAAA
GAAGAGAATTTCTGGTTGCTGCTTGCGGACTCCTTTTCAAATGATGTGTGGCTCTCCCAG
AAGGTTAGTTTCATGGATGAATCTACAGCAATCATTGCTGTATCAAAAACAATTCAGGAG
TCAAAGGAAGGGTCTGGTGCAAGTGCAAGGGAAATAAATGTTGCCGTTAAAGAAGCAATT
GAGAAAGTTAAAAATGGTTCGAGGCTGGTAATGGGGAAGTTCCAAGCTCCAGCTGAGGGA
AACTACAACTTGAGTTCTTTTTGCTTATGTGACTCTTGGATTGGTTGTGATGCAAAGTCG
AATATAAAGTTAAAGGTAATGAAACGCAGCAGAGCTGGGACCAGAGGCGGTCTCACAGCA
GATGAGACTCCTGCCATGGAGGATGGAATTGAGGAGGATGAGGAAGAAGAAGAAGAAGAT
TATGATGATTATGAAAGTGAATACAGCGAAGATGAAGAAGATACAAAGGAAATAGAGAGT
AAAGGAATGGTGGGCAATGGCTCGGGCCACAATAAGGGCAGTGGTTCAAGCTCTGATGAA
TCTGGTTCAGAGGCCGATTAA

Peptide Sequence

PEP ID

XP_016513909.1
PEP Infomation

PREDICTED: dnaJ protein ERDJ2A-like [Nicotiana tabacum]
Sequence

MAASEENSALFPIFVLTLMALPLVPYTIVNLFGAFKKKAAKINCQCSVCVRSGKYHKSIF
KRISNFSTYSNLTLVLLWVVMAVLVYYIKHISTEVQIFEPFSILGLEHGASDSEIKKAYR
RLSIQYHPDKNPDPEAHSYFVEYISKAYQALTDPISRENFEKYGHPDGRQGLQMGIALPQ
FLLNIDGASEGILLLGIVGVCIILPLTISVIYLSRSSKYTGNYVMHSTLAAYYHLMKPSL
APSKVMDVFIKASEFMDIPVRRTDEEPLQRLFVLVRSELNLDLKNIRQEQAKFWKQHPAL
VKTELLLQTQLTRETAALSPTLQRDFRRVLELAPRLLEELMKMAIIPRPPVGHGWLRPAI
GVVELSQSVVQAVPLSARKAAGGSSEGYAPFLQLPYFSEAVVKKIARKKVRTFQDFRDMT
PDEREDLLTQVAGFSNSESHDVEMVLKMMPSVTIDITCETEGEEGIQEGDIVTMHAWVTL
KRGNGLIRALPHCPYFPSDKEENFWLLLADSFSNDVWLSQKVSFMDESTAIIAVSKTIQE
SKEGSGASAREINVAVKEAIEKVKNGSRLVMGKFQAPAEGNYNLSSFCLCDSWIGCDAKS
NIKLKVMKRSRAGTRGGLTADETPAMEDGIEEDEEEEEEDYDDYESEYSEDEEDTKEIES
KGMVGNGSGHNKGSGSSSDESGSEAD

Transcript Sequence

Gene sequence data has not been registered.